Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs8062874 chr16:8716036 C/T 5.14E-5 289 5.72 32.93 25.57 KM Plot
KIRP rs8062906 chr16:982456 C/T 5.87E-6 275 26.83 26.37 12.13 KM Plot
KIRP rs8063843 chr16:8716624 C/T 6.85E-5 285 5.72 31.57 25.58 KM Plot
KIRP rs8065975 chr17:80829288 C/G 2.97E-6 285 26.37 22.8 16.77 KM Plot
KIRP rs8069199 chr17:30281845 A/G 2.52E-12 283 26.6 24.3 10.37 KM Plot
KIRP rs8069402 chr17:80778509 C/G 1.0E-8 282 25.93 25.6 16.4 KM Plot
KIRP rs8070939 chr17:30277956 T/C 2.6E-12 282 26.6 24.48 10.37 KM Plot
KIRP rs8077092 chr17:30281992 T/C 1.68E-12 279 26.63 23.85 10.37 KM Plot
KIRP rs8079088 chr17:80780058 C/T 1.0E-8 282 25.93 25.6 16.4 KM Plot
KIRP rs8086134 chr18:3291714 C/T 2.08E-6 289 11.13 24.3 25.97 KM Plot
KIRP rs8094729 chr18:32851114 C/G 7.89E-5 285 10.7 29.03 25.53 KM Plot
KIRP rs8099738 chr18:55579183 C/T 9.87E-5 289 26.2 20.12 12.83 KM Plot
KIRP rs8100201 chr19:23620540 C/A 7.68E-5 285 27.75 24.03 20.8 KM Plot
KIRP rs8126732 chr21:44240425 A/G 0.000203 285 25.58 34.28 13.07 KM Plot
KIRP rs8176796 chr11:20968852 C/G 1.29E-5 289 25.57 30.8 19.58 KM Plot